It's a hardware limitation. The Traktor F1 has absolute rotaries, so it will always stick/jump from where you start dialing. (Except the one on top of the Browse button, you can try that one)
Arena can send midi feedback to update your rotary, like in the case of the Akai APC. Those rotaries are endless and have a led feedback so Arena can tell it to jump to a different value but in the case of the F1 the software can not tell the Rotary to jump to a value as its a physical rotary from start to end.
I hope you understand what I mean.
On the other hand maybe try to explain what you are trying to achieve in terms of effects and what you want on and off but also when. Nowadays the Envelope can help with a lot of scenarios.